MiSeq(R) system upgrade

[plpla]

This is to allow conversion of the new MiSeq-SampleSheet format to the CASAVA-SampleSheet format.
This patch is needed because of a MiSeq(R) system upgrade.
Signed-off-by: Pier-Luc Plante pier-luc.plante.1@ulaval.ca

[sebhtml]

First, the commit message should say what changed in the MiSeq format.

Second, the original file has 172 lines.

The diff --stat says 1 files changed, 177 insertions(+), 172 deletions(-),
which is ridiculous (at this point, this is not a patch, but more like a
complete re-write.

This is because new file has Windows new lines (\r\n). Please fix this to
UNIX new lines (\n).

Third, a commit message should be like:

short title

A paragraph or two, if necessary

Signed-off by line

On 17/10/12 03:19 PM, plpla wrote:

This is to allow conversion of the new MiSeq-SampleSheet format to the CASAVA-SampleSheet format.
This patch is needed because of a MiSeq(R) system upgrade.
Signed-off-by: Pier-Luc Plante pier-luc.plante.1@ulaval.ca mailto:pier-luc.plante.1@ulaval.ca

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    You can merge this Pull Request by running:

git pull https://github.com/plpla/NGS-Pipelines master

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#3

    Commit Summary

• This is to allow conversion of the new MiSeq-SampleSheet format to the

  File Changes
  

• M Illumina_MiSeq/ElectricFancyFox.py (349)

  Patch Links
  

• https://github.com/sebhtml/NGS-Pipelines/pull/3.patch

• https://github.com/sebhtml/NGS-Pipelines/pull/3.diff

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