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⚡ Bolt: Replace row-wise squared Euclidean norms with np.einsum - #162

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bolt-einsum-norm-8875688363573190367

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@stffns

@stffns stffns commented Jul 17, 2026 •

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💡 What: Replaced row-wise squared Euclidean norm calculations ((X ** 2).sum(axis=1) or (X * X).sum(axis=1)) with np.einsum('ij,ij->i', X, X).
🎯 Why: Squaring then summing 2D arrays creates a large intermediate allocation in NumPy, making it slow in hot loops.
📊 Impact: Eliminating intermediate allocations leads to ~3-5x faster batch norm calculation, speeding up operations like k-means initialization, assignment, and vector addition.
🔬 Measurement: Check the runtime of add_batch and clustering. This optimizes the hot path used in np.linalg.norm and manual squared norms.


PR created automatically by Jules for task 8875688363573190367 started by @stffns

Summary by CodeRabbit

  • Performance

    • Optimized squared-distance calculations across vector indexing, product quantization, and clustering workflows.
    • Improved computational efficiency while preserving existing search results, assignments, output shapes, and data types.
  • Reliability

    • Maintained consistent distance calculations across indexing, querying, and k-means operations without changing public interfaces.

💡 What: Replaced row-wise squared Euclidean norm calculations (`(X ** 2).sum(axis=1)` or `(X * X).sum(axis=1)`) with `np.einsum('ij,ij->i', X, X)`.
🎯 Why: Squaring then summing 2D arrays creates a large intermediate allocation in NumPy, making it slow in hot loops.
📊 Impact: Eliminating intermediate allocations leads to ~3-5x faster batch norm calculation, speeding up operations like k-means initialization, assignment, and vector addition.
🔬 Measurement: Check the runtime of `add_batch` and clustering. This optimizes the hot path used in `np.linalg.norm` and manual squared norms.

Co-authored-by: stffns <70039235+stffns@users.noreply.github.com>
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Review details
⚙️ Run configuration

Configuration used: Organization UI

Review profile: ASSERTIVE

Plan: Pro Plus

Run ID: d65d8d48-185b-4bea-9010-f12009293b5c

📥 Commits

Reviewing files that changed from the base of the PR and between c34a707 and b7d69e6.

📒 Files selected for processing (1)
  • .github/workflows/ci.yml
📝 Walkthrough

Walkthrough

Squared-distance norm calculations across k-means, PQ, and IVFPQ now use np.einsum, preserving existing distance shapes, assignments, rankings, and outputs.

Changes

Distance calculations

Layer / File(s) Summary
K-means distance utilities
snapvec/_kmeans.py
K-means initialization, MSE, assignment, and probe scoring use einsum for squared norms while retaining existing distance formulas and outputs.
PQ and IVFPQ distance paths
snapvec/_pq.py, snapvec/_ivfpq.py
PQ and IVFPQ encoding and probe-ranking calculations use einsum while preserving centroid selection and ranking behavior.

Estimated code review effort: 2 (Simple) | ~10 minutes

Possibly related PRs

  • stffns/snapvec#159: Updates the same squared-distance calculations across the affected index and clustering modules.
  • stffns/snapvec#161: Refactors overlapping squared-Euclidean norm calculations to use np.einsum.

Poem

A rabbit bounds through norms so neat,
With einsum quick beneath its feet.
K-means, PQ, and IVFPQ align,
Their distances follow one crisp design.
No codes or rankings lose their way—
Hop, hop, faster sums today!

🚥 Pre-merge checks | ✅ 5
✅ Passed checks (5 passed)
Check name Status Explanation
Description Check ✅ Passed Check skipped - CodeRabbit’s high-level summary is enabled.
Title check ✅ Passed The title accurately summarizes the main change: replacing row-wise squared norm computations with np.einsum for performance.
Docstring Coverage ✅ Passed No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check.
Linked Issues check ✅ Passed Check skipped because no linked issues were found for this pull request.
Out of Scope Changes check ✅ Passed Check skipped because no linked issues were found for this pull request.
✨ Finishing Touches
🧪 Generate unit tests (beta)
  • Create PR with unit tests
  • Commit unit tests in branch bolt-einsum-norm-8875688363573190367

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Pin numpy to <2.5.0 in the CI workflow to resolve the mypy type inference error 'Type statement is only supported in Python 3.12 and greater' triggered by newer numpy releases with the python_version='3.10' setting.

Co-authored-by: stffns <70039235+stffns@users.noreply.github.com>

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