v1.0.0

.Rbuildignore

@@ -23,3 +23,4 @@ vignettes/precompile\.R
 ^\.positai$
 ^\.claude$
 ^CLAUDE\.md$
+^Rplots\.pdf$

.github/workflows/prchecks.yml

@@ -24,7 +24,7 @@ jobs:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
 
       - uses: r-lib/actions/setup-r@v2
         with:
@@ -54,7 +54,7 @@ jobs:
         shell: Rscript {0}
 
       - name: Save binary artifact
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: ${{ matrix.config.asset_name }}
           path: build/
@@ -78,7 +78,7 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
 
       - uses: r-lib/actions/setup-r@v2
 
@@ -97,7 +97,7 @@ jobs:
     runs-on: macOS-latest
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
         with:
           fetch-depth: 0
 

.github/workflows/pushrelease.yml

@@ -24,7 +24,7 @@ jobs:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
 
       - uses: r-lib/actions/setup-r@v2
         with:
@@ -55,7 +55,7 @@ jobs:
         shell: Rscript {0}
 
       - name: Save binary artifact
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: ${{ matrix.config.asset_name }}
           path: build/
@@ -75,7 +75,7 @@ jobs:
       contents: write
     steps:
       - name: Checkout one
-        uses: actions/checkout@v4
+        uses: actions/checkout@v7
         with:
           fetch-depth: '0'
       - name: Bump version and push tag
@@ -87,15 +87,15 @@ jobs:
           DEFAULT_BUMP: patch
           RELEASE_BRANCHES: main
       - name: Checkout two
-        uses: actions/checkout@v4
+        uses: actions/checkout@v7
 
       - name: Extract version
         run: |
           echo "PACKAGE_VERSION=$(grep '^Version' DESCRIPTION | sed 's/.*: *//')" >> $GITHUB_ENV
           echo "PACKAGE_NAME=$(grep '^Package' DESCRIPTION | sed 's/.*: *//')" >> $GITHUB_ENV
 
       - name: Download binaries
-        uses: actions/download-artifact@v4
+        uses: actions/download-artifact@v8
 
       - name: Rename binaries release
         shell: bash
@@ -107,12 +107,26 @@ jobs:
           echo "Renamed files"
           ls netrics_*
 
+      - name: Extract release notes from NEWS.md
+        shell: bash
+        run: |
+          # Take the NEWS.md section for this version, else the topmost section.
+          awk -v ver="${{ env.PACKAGE_NAME }} ${{ env.PACKAGE_VERSION }}" '
+            /^# / { if (found) exit; if (substr($0, 3) == ver) { found = 1; next } }
+            found { print }
+          ' NEWS.md > RELEASE_NOTES.md
+          if [ ! -s RELEASE_NOTES.md ]; then
+            awk 'NR > 1 && /^# / { exit } NR > 1 { print }' NEWS.md > RELEASE_NOTES.md
+          fi
+          cat RELEASE_NOTES.md
+
       - name: Create Release and Upload Assets
         id: create_release
         uses: softprops/action-gh-release@v2
         with:
           tag_name: ${{ steps.newtag.outputs.tag }}
           name: Release ${{ steps.newtag.outputs.tag }}
+          body_path: RELEASE_NOTES.md
           draft: false
           prerelease: false
           fail_on_unmatched_files: true
@@ -132,7 +146,7 @@ jobs:
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
 
       - uses: r-lib/actions/setup-r@v2
 

.gitignore

@@ -8,6 +8,7 @@ docs/
 working/*
 /doc/
 /Meta/
+Rplots.pdf
 tests/testthat/Rplots.pdf
 .DS_Store
 CRAN-SUBMISSION

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: netrics
-Title: Many Ways to Measure and Classify Membership for Networks, Nodes, and Ties
-Version: 0.4.1
+Title: Many Marks, Measures, Memberships, and Motifs for Networks
+Version: 1.0.0
 Description: Many tools for calculating network, node, or tie
    marks, measures, motifs and memberships of many different types of networks.
    Marks identify structural positions, measures quantify network properties,
@@ -15,7 +15,7 @@ Encoding: UTF-8
 LazyData: true
 Depends: 
     R (>= 4.1.0),
-    manynet (>= 2.1.2)
+    manynet (>= 2.2.3)
 Imports:
     dplyr,
     igraph (>= 2.1.0)
@@ -44,4 +44,4 @@ Config/Needs/website:
 Config/testthat/parallel: true
 Config/testthat/edition: 3
 Config/testthat/start-first: tutorials_netrics, measure_net, member_nodes, measure_nodes
-Config/roxygen2/version: 8.0.0
+Config/roxygen2/version: 8.1.0

NAMESPACE

@@ -3,6 +3,10 @@
 export(cluster_concor)
 export(cluster_cosine)
 export(cluster_hierarchical)
+export(coreness_correlation)
+export(coreness_hub)
+export(coreness_rich)
+export(coreness_transition)
 export(k_elbow)
 export(k_gap)
 export(k_silhouette)
@@ -17,12 +21,16 @@ export(net_by_adhesion)
 export(net_by_assortativity)
 export(net_by_balance)
 export(net_by_betweenness)
+export(net_by_bipartivity)
 export(net_by_closeness)
 export(net_by_cohesion)
+export(net_by_compactness)
 export(net_by_components)
 export(net_by_congruency)
 export(net_by_connectedness)
 export(net_by_core)
+export(net_by_cyclicality)
+export(net_by_decay)
 export(net_by_degree)
 export(net_by_density)
 export(net_by_diameter)
@@ -35,11 +43,13 @@ export(net_by_harmonic)
 export(net_by_heterophily)
 export(net_by_homophily)
 export(net_by_immunity)
+export(net_by_inconsistency)
 export(net_by_indegree)
 export(net_by_independence)
 export(net_by_infection_complete)
 export(net_by_infection_peak)
 export(net_by_infection_total)
+export(net_by_integration)
 export(net_by_length)
 export(net_by_modularity)
 export(net_by_outdegree)
@@ -64,6 +74,7 @@ export(net_x_correlation)
 export(net_x_dyad)
 export(net_x_hazard)
 export(net_x_hierarchy)
+export(net_x_homophily)
 export(net_x_mixed)
 export(net_x_stability)
 export(net_x_tetrad)
@@ -80,7 +91,9 @@ export(node_by_brokering_activity)
 export(node_by_brokering_exclusivity)
 export(node_by_closeness)
 export(node_by_constraint)
+export(node_by_core)
 export(node_by_coreness)
+export(node_by_decay)
 export(node_by_deg)
 export(node_by_degree)
 export(node_by_distance)
@@ -99,6 +112,7 @@ export(node_by_hub)
 export(node_by_indegree)
 export(node_by_induced)
 export(node_by_information)
+export(node_by_integration)
 export(node_by_kcoreness)
 export(node_by_leverage)
 export(node_by_multidegree)
@@ -107,6 +121,7 @@ export(node_by_outdegree)
 export(node_by_pagerank)
 export(node_by_posneg)
 export(node_by_power)
+export(node_by_radiality)
 export(node_by_randomwalk)
 export(node_by_reach)
 export(node_by_reciprocity)
@@ -119,6 +134,7 @@ export(node_by_vitality)
 export(node_in_adopter)
 export(node_in_automorphic)
 export(node_in_betweenness)
+export(node_in_block)
 export(node_in_brokering)
 export(node_in_community)
 export(node_in_component)
@@ -128,8 +144,10 @@ export(node_in_equivalence)
 export(node_in_fluid)
 export(node_in_greedy)
 export(node_in_infomap)
+export(node_in_labels)
 export(node_in_leiden)
 export(node_in_louvain)
+export(node_in_motif)
 export(node_in_optimal)
 export(node_in_partition)
 export(node_in_regular)
@@ -156,13 +174,22 @@ export(node_is_pendant)
 export(node_is_random)
 export(node_is_recovered)
 export(node_is_universal)
+export(node_x_alters)
 export(node_x_brokerage)
+export(node_x_clique)
 export(node_x_dyad)
 export(node_x_exposure)
 export(node_x_path)
+export(node_x_similarity)
 export(node_x_tetrad)
 export(node_x_tie)
+export(node_x_ties)
 export(node_x_triad)
+export(regularity_rege)
+export(regularity_rolesim)
+export(split_bins)
+export(split_kmeans)
+export(split_quantiles)
 export(tie_by_betweenness)
 export(tie_by_closeness)
 export(tie_by_cohesion)
@@ -183,53 +210,61 @@ export(tie_is_simmelian)
 export(tie_is_transitive)
 export(tie_is_triangular)
 export(tie_is_triplet)
-importFrom(dplyr,filter)
-importFrom(dplyr,group_by)
-importFrom(dplyr,mutate)
-importFrom(dplyr,select)
-importFrom(igraph,V)
-importFrom(igraph,adhesion)
-importFrom(igraph,all_shortest_paths)
-importFrom(igraph,alpha_centrality)
-importFrom(igraph,articulation_points)
-importFrom(igraph,assortativity_degree)
-importFrom(igraph,cohesion)
-importFrom(igraph,components)
-importFrom(igraph,decompose)
-importFrom(igraph,degree)
-importFrom(igraph,delete_edges)
-importFrom(igraph,delete_vertices)
-importFrom(igraph,diameter)
-importFrom(igraph,distances)
-importFrom(igraph,edge_betweenness)
-importFrom(igraph,edge_density)
-importFrom(igraph,feedback_arc_set)
-importFrom(igraph,fit_power_law)
-importFrom(igraph,graph_from_incidence_matrix)
-importFrom(igraph,is_bipartite)
-importFrom(igraph,ivs_size)
-importFrom(igraph,knn)
-importFrom(igraph,largest_ivs)
-importFrom(igraph,make_ego_graph)
-importFrom(igraph,mean_distance)
-importFrom(igraph,power_centrality)
-importFrom(igraph,reciprocity)
-importFrom(igraph,transitivity)
-importFrom(igraph,triad_census)
-importFrom(igraph,triangles)
-importFrom(igraph,vcount)
-importFrom(igraph,which_loop)
-importFrom(igraph,which_multiple)
-importFrom(igraph,which_mutual)
-importFrom(manynet,as_igraph)
-importFrom(manynet,is_complex)
-importFrom(manynet,is_twomode)
-importFrom(manynet,is_weighted)
-importFrom(manynet,tie_weights)
-importFrom(stats,as.dist)
-importFrom(stats,coef)
-importFrom(stats,complete.cases)
-importFrom(stats,cor)
-importFrom(stats,cutree)
-importFrom(stats,hclust)
-importFrom(stats,median)
+importFrom(dplyr,
+  filter,
+  group_by,
+  mutate,
+  select
+)
+importFrom(igraph,
+  V,
+  adhesion,
+  all_shortest_paths,
+  alpha_centrality,
+  articulation_points,
+  assortativity_degree,
+  cohesion,
+  components,
+  decompose,
+  degree,
+  delete_edges,
+  delete_vertices,
+  diameter,
+  distances,
+  edge_betweenness,
+  edge_density,
+  feedback_arc_set,
+  fit_power_law,
+  graph_from_incidence_matrix,
+  is_bipartite,
+  ivs_size,
+  knn,
+  largest_ivs,
+  make_ego_graph,
+  mean_distance,
+  power_centrality,
+  reciprocity,
+  transitivity,
+  triad_census,
+  triangles,
+  vcount,
+  which_loop,
+  which_multiple,
+  which_mutual
+)
+importFrom(manynet,
+  as_igraph,
+  is_complex,
+  is_twomode,
+  is_weighted,
+  tie_weights
+)
+importFrom(stats,
+  as.dist,
+  coef,
+  complete.cases,
+  cor,
+  cutree,
+  hclust,
+  median
+)