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- Split monolithic tview.py into bam.py, fasta.py, renderer.py, models.py, config.py - Add palette.yaml and style.yaml for externalized configuration - Use absolute GitHub URLs for README images so they render on PyPI - Update test outputs and add test_config.py
Adds a monochrome output mode that renders all text in black with no colored highlights (no mismatch yellow, no insertion purple, no palette-colored bases). Structural conventions (dots, commas, lowercase, dashes) are preserved. Includes two new pytest cases and README docs.
tmsincomb
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Feb 28, 2026
Bugs fixed: - README API examples now use correct `columns` parameter (#1) - Gaps render in grey (GAP_COLOR) instead of black (TEXT_COLOR) (#2) Testing: - Added test_bam.py with 17 tests: 12 unit tests for CIGAR ops (match, insertion, deletion, soft-clip, ref-skip, windowing, complex mixed CIGARs) + 5 integration tests using example BAMs (#3) CI/CD: - Added lint job (black --check, isort --check) to CI workflow (#4) - Added Python 3.12 to test matrix (#10) Config & docs: - Fixed homepage URLs to tmsincomb/tview (#5) - Added [compose] optional-dependency extra for patchworklib, moved patchworklib from core deps since it's not imported (#6) - Replaced print() with logging.info() in renderer (#7) - mono_sm tick-label font now uses 0.8x fontsize (#8) - Panel.ins_columns uses field(default_factory=set) (#11) Test output images updated to reflect gap color and font changes. https://claude.ai/code/session_0131auyCkmPyg7DpokpeA1Vw
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added all black classic mode and fixed pypi readme images