merck

This jupyter notebook walks you through taking a symptom code and looking for the diagnosis in a neo4j knowledge graph. Then outputs link to merck manual.

This is the Line of Therapy Algorithm, as described in the paper "Temporal phenotyping by mining healthcare data to derive lines of therapy for cancer" pending submission in the Journal of Biomedical Informatics.

An R package to create metadata structure for ADaM data analysis and reporting

A lightweight framework to enable hierarchical, heterogeneous dynamical systems co-integration. Batteries included!

A Julia package that implements a category of reaction (transportation) network-type dynamical systems.

Easily Create Production-Ready Rich Text Format (RTF) Table and Figure

Clinical trial simulation for time-to-event endpoints

Halyard is an extremely horizontally scalable Triplestore with support for Named Graphs, designed for integration of extremely large Semantic Data Models, and for storage and SPARQL 1.1 querying of the whole Linked Data universe snapshots.

POLO: web interface to MARCO-scored crystallization images

Sapiens is a human antibody language model based on BERT.

RDF2X converts big RDF datasets to the relational database model, CSV, JSON and ElasticSearch.

An R package for standard adverse events analysis

Interactive forest plot for adverse events analysis