rice-pathology

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ScholasticaQue / Bakanae-Effector-Analysis

A comparative genomics and phylogeographic pipeline for rice bakanae disease. Features secretome filtering (SignalP/TargetP/EffectorP), PHI-base virulence prioritization , and OrthoFinder-based pangenome clustering coupled with BEAST2 diffusion analysis to model global pathogen spread.

bioinformatics comparative-genomics effector-prediction fungal-genomics rice-pathology

Updated Apr 15, 2026
Python

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rice-pathology

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ScholasticaQue / Bakanae-Effector-Analysis

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