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update to v1.22 #28

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Merged
sorelfitzgibbon merged 2 commits into from
Aug 29, 2025
Merged

update to v1.22 #28

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09f6137
update to v1.22
sorelfitzgibbon Jun 6, 2025
8d63e74
update release data
sorelfitzgibbon Aug 29, 2025
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3 changes: 3 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -9,6 +9,9 @@ This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.htm

## [Unreleased]

## [1.22] - 2024-08-29
- Update BCFtools 1.21 to 1.22
Comment on lines +12 to +13

Copilot AI Aug 29, 2025

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[nitpick] The changelog entry format should be consistent with existing entries. Consider using 'Update BCFtools from 1.21 to 1.22' to match the pattern used in line 16.

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## [1.22] - 2024-08-29
- Update BCFtools 1.21 to 1.22
- Update BCFtools from 1.21 to 1.22

Copilot uses AI. Check for mistakes.

## [1.21] - 2024-10-09
- Update BCFtools 1.20 to 1.21

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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -3,7 +3,7 @@ ARG MINIFORGE_VERSION=24.7.1-2
FROM condaforge/mambaforge:${MINIFORGE_VERSION} AS builder

# Use mamba to install tools and dependencies into /usr/local
ARG BCFTOOLS_VERSION=1.21
ARG BCFTOOLS_VERSION=1.22
RUN mamba create -qy -p /usr/local \
-c bioconda \
-c conda-forge \
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -13,7 +13,7 @@ GitHub repository [here](http://github.com/samtools/bcftools).
# Version
| Tool | Version |
|------|---------|
| BCFtools | 1.21 |
| BCFtools | 1.22 |


---
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2 changes: 1 addition & 1 deletion metadata.yaml
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Expand Up @@ -5,7 +5,7 @@ Maintainers: ['mmootor@mednet.ucla.edu']
Contributors: ['Timothy Sanders', 'Mohammed Faizal Eeman Mootor', 'John Sahrmann', 'Sorel Fitz-Gibbon']
Languages: ['Dockerfile']
Tools: ['BCFtools']
Version: ['1.21']
Version: ['1.22']
Purpose of tool: 'BCFtools is a program for variant calling and manipulating files in the Variant Call Format (VCF) and its binary counterpart BCF.'
References: 'https://samtools.github.io/bcftools/howtos/publications.html'
image_name: 'bcftools'
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