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build(deps-dev): bump mehari from 0.41.2 to 0.42.0 in /mehari-python#983

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dependabot/uv/mehari-python/mehari-0.42.0
Apr 17, 2026
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build(deps-dev): bump mehari from 0.41.2 to 0.42.0 in /mehari-python#983
github-actions[bot] merged 1 commit intomainfrom
dependabot/uv/mehari-python/mehari-0.42.0

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@dependabot dependabot bot commented on behalf of github Apr 17, 2026

Bumps mehari from 0.41.2 to 0.42.0.

Release notes

Sourced from mehari's releases.

v0.42.0

0.42.0 (2026-04-14)

⚠ BREAKING CHANGES

  • add experimental option to predict compound effect of multiple variants on the same transcript, allow building txdb from gff3+fasta (#972)
  • allow arbitrary assemblies; this impacts the transcript database protobuf definitions, though we tried keeping them backwards compatible. This also impacts the server REST api.
  • refactor annotate seqvars cli (e.g., --input and --output and introduce --output-format etc, allow stdin/stdout)

Features

  • add experimental option to predict compound effect of multiple variants on the same transcript, allow building txdb from gff3+fasta (#972) (e377c4e)
  • add options to include reference/alternative cDNA and protein sequences in output (#966) (ec87cb0)
Commits
  • 8ba6217 chore: release main (#967)
  • e377c4e feat!: add experimental option to predict compound effect of multiple variant...
  • a4a72c6 chore: add github pages config etc (#981)
  • 4763f28 build(deps): bump rand from 0.10.0 to 0.10.1 (#982)
  • 9f7f5b7 build(deps-dev): bump pytest from 9.0.2 to 9.0.3 in /mehari-python (#979)
  • 762c33d update dependabot.yml
  • 1e6bde7 build(deps): bump insta from 1.46.3 to 1.47.2 (#975)
  • 23720bc build(deps): bump codecov/codecov-action from 5 to 6 (#973)
  • 6b039c3 build(deps): bump uuid from 1.22.0 to 1.23.0 (#974)
  • 7eacd54 build(deps): bump actions/checkout from 4 to 6 (#968)
  • Additional commits viewable in compare view

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Bumps [mehari](https://github.com/varfish-org/mehari) from 0.41.2 to 0.42.0.
- [Release notes](https://github.com/varfish-org/mehari/releases)
- [Changelog](https://github.com/varfish-org/mehari/blob/main/CHANGELOG.md)
- [Commits](v0.41.2...v0.42.0)

---
updated-dependencies:
- dependency-name: mehari
  dependency-version: 0.42.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python:uv Pull requests that update python:uv code labels Apr 17, 2026
@github-actions github-actions bot enabled auto-merge (squash) April 17, 2026 21:17
@github-actions github-actions bot merged commit 4d0d65c into main Apr 17, 2026
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@github-actions github-actions bot deleted the dependabot/uv/mehari-python/mehari-0.42.0 branch April 17, 2026 21:43
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