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AllTheBacteria
atb-cli
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docs(changelog): stamp v0.22.1
docs
#60:
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fix(amr): apply GTDB species matching on the SQLite index path (#50)
docs
#59:
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fix(amr): apply GTDB species matching on the SQLite index path
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#58:
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#50
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thanhleviet
30s
fix/amr-index-gtdb-species
fix/amr-index-gtdb-species
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docs(guides): note GTDB-aware --species and --genus matching
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docs(changelog): stamp v0.22.0
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#56:
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feat(query): match GTDB taxonomy for --species and --genus (#48)
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feat(query): match GTDB taxonomy for --species and --genus
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#54:
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#48
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feat/gtdb-species-normalize
feat/gtdb-species-normalize
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Merge pull request #46 from AllTheBacteria/chore/gofmt-drift
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#53:
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style: fix gofmt drift and gate formatting in CI
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#52:
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#46
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chore/gofmt-drift
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Merge pull request #45 from AllTheBacteria/fix/keep-unknown-command-hint
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fix(cli): keep the --help hint on an unknown command
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#50:
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fix/keep-unknown-command-hint
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docs(changelog): stamp v0.21.1
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#49:
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Merge pull request #44 from AllTheBacteria/fix/double-error-print
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fix(cli): print each error once
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#47:
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fix/double-error-print
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docs(changelog): stamp v0.21.0
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#46:
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Merge pull request #43 from AllTheBacteria/feat/query-by-run-accession
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feat(query): filter by sequencing run accession; fix NA reaching download --from
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#44:
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#43
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feat/query-by-run-accession
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docs(changelog): stamp v0.20.0
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#43:
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Merge pull request #42 from AllTheBacteria/feat/columns-command
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feat(query): add atb columns and validate --columns names
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#41:
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#42
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29s
feat/columns-command
feat/columns-command
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docs(changelog): stamp v0.19.0
docs
#40:
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feat(amr): add --species-like wildcard filter (#41)
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#39:
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feat(amr): add --species-like wildcard filter
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#38:
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#41
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feat/amr-species-like
feat/amr-species-like
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Merge pull request #40 from AllTheBacteria/feat/agc-balanced-migration
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docs(agc): align design docs with shipped v0.18.1
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#36:
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#40
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feat/agc-balanced-migration
feat/agc-balanced-migration
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