Add functions for generating species codes and managing parquet datasets - #27

Merged

AbhirupaGhosh merged 7 commits into

mainfrom

Update_matrix_generation

Jul 31, 2026

Commits on Jul 22, 2026

Add functions for generating species codes and managing parquet datasets
AbhirupaGhosh
committed
00ff195

Commits on Jul 28, 2026

Update generate_matrices_ml.R
AbhirupaGhosh
committed
e1aa5dd
Refactor generateMLInputs function to use parquet directory instead of DuckDB path
AbhirupaGhosh
committed
eb4833b
Add relevant example data for testing generateMLInputs() and remove existing files.
AbhirupaGhosh
committed
edcf43a

Commits on Jul 29, 2026

Add Shigella sonnei example data
AbhirupaGhosh
committed
964f0b8

Commits on Jul 30, 2026

Update metadata.parquet after https://github.com/JRaviLab/amRdata/pull/37
AbhirupaGhosh
committed
db4c105

Commits on Jul 31, 2026

Merge remote-tracking branch 'origin/main' into Update_matrix_generation
amcim
committed
a923cdf