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Fix fL/pL unit labels on stommel_boyd2015_volumes.csv + clarify scope #34

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Fix fL/pL unit labels on stommel_boyd2015_volumes.csv + clarify scope #34

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85cdfa0
fix: label 10⁻¹⁵ m³ as 1 pL not 1 fL in stommel_boyd2015_volumes
madsCodeBuddy Apr 29, 2026
7eeda8a
docs: clarify Notes — upper bound covers eukaryotic microbes
madsCodeBuddy Apr 29, 2026
ae948fa
fix: drop liter prefix from labels — keep cubic-distance throughout
madsCodeBuddy Apr 29, 2026
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6 changes: 3 additions & 3 deletions data/datasets/stommel_boyd2015_volumes.csv
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Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
,Name,Time_min,Time_max,Space_min,Space_max,Color,Reference(s),Category,ProcessType,Notes,label_side,x_offset,y_offset,label_text,start_visible
0,Diffusion boundary layers,1.00E+01: ~10 seconds,1.00E+03: ~15 minutes,1.00E-13: ~100 µm × 100 µm × 10 µm,1.00E-06: 1 cm³,#7BA3B3,"Boyd et al. (2015); cf. Dickey (2003), Haury et al. (1978)",Physical processes,Physical,L_v = 1 mm – 1 cm (thin layers); V = L_h² × L_v.,left,-5,0,,True
1,Gene & protein expression,6.00E+01: ~1 minute,1.00E+04: ~3 hours,1.00E-18: 1 µm³,1.00E-15: 1 fL (single cell),#6B9D9D,"Boyd et al. (2015); cf. Dickey (2003), Haury et al. (1978)",Biological processes,Biological,Intracellular only. Space_max = 10⁻¹⁵ m³. Number 1-2-3 in diagram.,left,-5,0,,True
2,Microbial growth (cellular),1.00E+02: ~2 minutes,1.73E+05: ~2 days,1.00E-18: 1 µm³,1.00E-15: 1 fL (single cell),#6B9D9D,"Boyd et al. (2015); cf. Dickey (2003), Haury et al. (1978)",Biological processes,Biological,Intracellular & single-organism scale only. Space_max = 10⁻¹⁵ m³. Number 4 in diagram.,right,5,15,,True
3,Community metabolism (patch),3.60E+03: ~1 hour,3.00E+07: ~1 year,1.00E-15: 1 fL (biofilm base),1.00E-03: 1 L (small colony),#6B9D9D,"Boyd et al. (2015); cf. Dickey (2003), Haury et al. (1978)",Biological processes,Biological,Community-level microbial metabolism at patch/colony scale.,right,5,-25,,True
1,Gene & protein expression,6.00E+01: ~1 minute,1.00E+04: ~3 hours,1.00E-18: 1 µm³,1.00E-15: 1000 µm³,#6B9D9D,"Boyd et al. (2015); cf. Dickey (2003), Haury et al. (1978)",Biological processes,Biological,Intracellular only. Space_max = 1000 µm³ covers eukaryotic microbes (yeast ~30-50 µm³, small algae up to ~1000 µm³); bacteria are ~1-10 µm³. Number 1-2-3 in diagram.,left,-5,0,,True
2,Microbial growth (cellular),1.00E+02: ~2 minutes,1.73E+05: ~2 days,1.00E-18: 1 µm³,1.00E-15: 1000 µm³,#6B9D9D,"Boyd et al. (2015); cf. Dickey (2003), Haury et al. (1978)",Biological processes,Biological,Intracellular & single-organism scale only. Space_max = 1000 µm³ covers eukaryotic microbes (yeast, small algae); bacteria are ~1-10 µm³. Number 4 in diagram.,right,5,15,,True
3,Community metabolism (patch),3.60E+03: ~1 hour,3.00E+07: ~1 year,1.00E-15: 1000 µm³,1.00E-03: 1 L (small colony),#6B9D9D,"Boyd et al. (2015); cf. Dickey (2003), Haury et al. (1978)",Biological processes,Biological,Community-level microbial metabolism at patch/colony scale. Space_min = 1000 µm³ corresponds to an early biofilm cluster (~1000 cells), not a single attached cell.,right,5,-25,,True
4,Habitat-scale hydrodynamics,1.00E+03: ~15 minutes,1.00E+06: ~12 days,1.00E+05: 10⁵ m³,1.00E+10: 10¹⁰ m³,#7BA3B3,"Boyd et al. (2015); cf. Dickey (2003), Haury et al. (1978)",Physical processes,Physical,L_v = 10–100 m (mixed layer depth); V = L_h² × L_v. Number 5 in diagram.,right,5,-25,,False
5,Submesoscale eddies,1.00E+04: ~3 hours,1.00E+06: ~12 days,1.00E+08: 10⁸ m³,5.00E+12: 5×10¹² m³,#7BA3B3,"Boyd et al. (2015); cf. Dickey (2003), Haury et al. (1978)",Physical processes,Physical,L_v = 100–500 m; V = L_h² × L_v.,left,-5,0,,True
6,Mesoscale eddies,6.05E+05: ~1 week,1.00E+07: ~4 months,5.00E+10: 5×10¹⁰ m³,2.00E+15: 2×10¹⁵ m³,#7BA3B3,Boyd et al. (2015); Chelton et al. (2011); Dickey (2003),Physical processes,Physical,L_v = 500–2000 m (thermocline depth); V = L_h² × L_v. Number 7 in diagram.,left,-5,0,,True
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