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Merge pull request #392 from bedapub/swalpe-patch-1
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#56:
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Merge branch 'main' into swalpe-patch-1
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Merge pull request #394 from bedapub/add-celltype-Th2CD4Tcell
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#54:
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Merge pull request #393 from bedapub/swalpe-patch-2
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#53:
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Add T-helper 2 cell to cell type nomenclature
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add-celltype-Th2CD4Tcell
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Update CellNames_scseqCMs6_Extrasigs.mouse.gmt
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Update CellNames_scseqCMs6_Extrasigs.gmt
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Update CellNames_scseqCMs6_Extrasigs.gmt
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Update CellNames_scseqCMs6_sigs.mouse.gmt
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swalpe-patch-2
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Update CellNames_scseqCMs6_sigs.gmt
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Update CellTypes_v1.tsv
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#46:
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Merge pull request #391 from bedapub/move-malignant-sigs-to-extrasigs
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#45:
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Move malignant signatures from main sigs to Extrasigs
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Merge pull request #390 from bedapub/fix/harmonize-cellnames-scseqcms…
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#43:
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Harmonize CellNames_scseqCMs6 signatures with malignant nomenclature …
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#42:
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fix/harmonize-cellnames-scseqcms6-malignant
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Merge pull request #389 from bedapub/llumdi-patch-1
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#41:
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Updated malignant parent to cell
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#40:
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Merge pull request #388 from bedapub/llumdi-patch-1
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#39:
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"harmonized malignant annotation, removed children"
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#38:
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Fix doctest: skip nomenclature_network when graphviz not installed
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#461:
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8m 54s
besca3
besca3
8m 54s
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Fix CI: use numerical tolerance for .gct file comparison
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#460:
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a9d3c2b
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11m 10s
besca3
besca3
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Fix report() to compute neighbors before UMAP if missing
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#459:
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5m 7s
besca3
besca3
5m 7s
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Fix notebook compatibility for besca3
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#458:
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8m 34s
besca3
besca3
8m 34s
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Fix CI: skip tests gracefully when Zenodo download fails
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#457:
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4m 31s
besca3
besca3
4m 31s
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Update workbook and tutorial notebooks with besca3 execution outputs
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#456:
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besca3
besca3
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